STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3HD81_PHYRMTubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (229 aa)    
Predicted Functional Partners:
H3GBZ8_PHYRM
Spindle pole body component.
    
 0.935
H3H2V3_PHYRM
Uncharacterized protein.
   
 0.926
H3HB77_PHYRM
Spindle pole body component.
   
 0.922
H3GB62_PHYRM
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
 
  
 0.906
H3GUY2_PHYRM
Uncharacterized protein.
   
 0.884
H3G6M4_PHYRM
Protein kinase domain-containing protein.
    
 0.621
H3GSZ7_PHYRM
Serine/threonine-protein kinase PLK.
    
 0.621
H3G8P2_PHYRM
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
 
 
 0.576
H3HB82_PHYRM
HORMA domain-containing protein.
    
   0.548
H3GC87_PHYRM
2-Hacid_dh_C domain-containing protein.
    
 0.525
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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