STRINGSTRING
Phyra84739 protein (Phytophthora ramorum) - STRING interaction network
"Phyra84739" - Lissencephaly-1 homolog in Phytophthora ramorum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phyra84739Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes (461 aa)    
Predicted Functional Partners:
Phyra81880
annotation not available (455 aa)
     
  0.884
Phyra83454
annotation not available (1169 aa)
     
  0.879
Phyra95204
annotation not available (656 aa)
       
  0.868
Phyra93410
annotation not available (266 aa)
       
  0.868
Phyra76398
annotation not available (1335 aa)
       
  0.868
Phyra79891
annotation not available (206 aa)
     
  0.811
Phyra75101
annotation not available (297 aa)
       
  0.810
Phyra93409
annotation not available (155 aa)
       
  0.747
Phyra86576
annotation not available (347 aa)
       
  0.747
Phyra73269
annotation not available (505 aa)
       
  0.747
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, P. ramorum, Phytophthora ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, ramorum blight, sudden oak death
Server load: low (20%) [HD]