STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA67586.1Asparaginyl beta-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)    
Predicted Functional Partners:
APA67587.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.907
APA71561.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.646
APA67512.1
Microcystin-dependent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.635
APA67510.1
Microcystin-dependent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.627
APA68745.1
valyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.607
APA67511.1
Tail collar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
APA69586.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.553
APA71556.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.545
APA69583.1
Cyclic peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
APA68746.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.477
Your Current Organism:
Janthinobacterium sp. 12014MBLMicDiv
NCBI taxonomy Id: 1644131
Other names: J. sp. 1_2014MBL_MicDiv, Janthinobacterium sp. 1_2014MBL_MicDiv
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.