STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403615_00259Unannotated protein. (145 aa)    
Predicted Functional Partners:
GCA_001403615_04375
Unannotated protein.
    
  0.856
GCA_001403615_00258
Unannotated protein.
       0.689
GCA_001403615_02693
Unannotated protein.
 
  
  0.642
GCA_001403615_04239
Unannotated protein.
  
  
  0.601
GCA_001403615_00747
Unannotated protein.
   
 
  0.566
GCA_001403615_00260
Unannotated protein.
       0.537
GCA_001403615_04861
Unannotated protein.
    
  0.532
GCA_001403615_03319
Unannotated protein.
    
  0.505
GCA_001403615_00996
Unannotated protein.
  
  
  0.490
GCA_001403615_00745
Unannotated protein.
 
  
  0.473
Your Current Organism:
Desnuesiella massiliensis
NCBI taxonomy Id: 1650662
Other names: CSUR P1918, Clostridiaceae bacterium mt10, D. massiliensis, DSM 101500, strain mt10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.