STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403615_01780Unannotated protein. (320 aa)    
Predicted Functional Partners:
GCA_001403615_01781
Unannotated protein.
 
 0.977
GCA_001403615_01779
Unannotated protein.
 
 
 0.967
GCA_001403615_04441
Unannotated protein.
 
 0.951
GCA_001403615_01563
Unannotated protein.
 
 0.923
GCA_001403615_04099
Unannotated protein.
 
 0.923
GCA_001403615_01567
Unannotated protein.
 
 
 0.904
GCA_001403615_04100
Unannotated protein.
 
 
 0.883
GCA_001403615_04438
Unannotated protein.
 
 
 0.818
GCA_001403615_04152
Unannotated protein.
 
 0.781
GCA_001403615_04707
Unannotated protein.
 
 0.768
Your Current Organism:
Desnuesiella massiliensis
NCBI taxonomy Id: 1650662
Other names: CSUR P1918, Clostridiaceae bacterium mt10, D. massiliensis, DSM 101500, strain mt10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.