STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THC_0699Macrolide ABC transporter ATP-binding protein. (225 aa)    
Predicted Functional Partners:
THC_0697
Hypothetical protein.
 
 0.999
THC_0698
Hypothetical protein.
 
 0.998
THC_0700
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.956
THC_0492
ABC transporter.
 
 0.913
THC_0813
Peptide ABC transporter permease.
 
 
    0.859
THC_0701
Hypothetical protein.
  
 
 0.841
THC_0576
Hypothetical protein.
 
 0.825
THC_1750
Hypothetical protein.
   
 
 0.816
THC_0748
Cobalt ABC transporter ATPase.
 
   
0.796
THC_0491
Secretion protein HylD.
 
 
 0.794
Your Current Organism:
Caldimicrobium thiodismutans
NCBI taxonomy Id: 1653476
Other names: C. thiodismutans, Caldimicrobium thiodismutans Kojima et al. 2016, DSM 29380, NBRC 110713, Thermodesulfobacteriaceae bacterium TF1, strain TF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.