Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OLO91031.1 | OLO91032.1 | BKH10_04730 | BKH10_04735 | NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| OLO91031.1 | efp | BKH10_04730 | BKH10_04745 | NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.527 |
| OLO91031.1 | nusB | BKH10_04730 | BKH10_04740 | NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.532 |
| OLO91032.1 | OLO91031.1 | BKH10_04735 | BKH10_04730 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| OLO91032.1 | efp | BKH10_04735 | BKH10_04745 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.527 |
| OLO91032.1 | nusB | BKH10_04735 | BKH10_04740 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.527 |
| efp | OLO91031.1 | BKH10_04745 | BKH10_04730 | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
| efp | OLO91032.1 | BKH10_04745 | BKH10_04735 | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
| efp | nusB | BKH10_04745 | BKH10_04740 | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.920 |
| nusB | OLO91031.1 | BKH10_04740 | BKH10_04730 | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.532 |
| nusB | OLO91032.1 | BKH10_04740 | BKH10_04735 | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
| nusB | efp | BKH10_04740 | BKH10_04745 | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.920 |