STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO89988.1Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)    
Predicted Functional Partners:
OLO89765.1
Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.976
OLO87655.1
Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.976
OLO87569.1
Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.976
OLO87568.1
Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.774
OLO89766.1
Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.721
OLO87567.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.612
OLO89987.1
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.465
Your Current Organism:
Actinomyces naeslundii
NCBI taxonomy Id: 1655
Other names: A. naeslundii, ATCC 12104, CCUG 18310, CCUG 2238, CCUG 32832, CCUG 35333, CDC W826, CIP 103128, DSM 43013, JCM 8349, NCTC 10301
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