STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001468855_01056Unannotated protein. (745 aa)    
Predicted Functional Partners:
GCA_001468855_00728
Unannotated protein.
  
     0.773
GCA_001468855_00958
Unannotated protein.
  
     0.773
GCA_001468855_00688
Unannotated protein.
  
     0.771
GCA_001468855_01127
Unannotated protein.
  
     0.758
GCA_001468855_00417
Unannotated protein.
  
     0.741
GCA_001468855_01055
Unannotated protein.
       0.732
GCA_001468855_01057
Unannotated protein.
 
    
0.703
GCA_001468855_00790
Unannotated protein.
  
     0.675
GCA_001468855_00662
Unannotated protein.
  
     0.602
GCA_001468855_00193
Unannotated protein.
  
     0.593
Your Current Organism:
candidate division TM6 bacterium UASB124
NCBI taxonomy Id: 1655308
Other names: c. division TM6 bacterium UASB124
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.