STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARR00003.1Cytochrome p450 family protein; Pfam match to PF00067.18 p450; Belongs to the cytochrome P450 family. (452 aa)    
Predicted Functional Partners:
ARR00002.1
Putative membrane protein.
 
 
 0.954
polA
DNA polymerase I, 5' --> 3' polymerase, 5' --> 3' and 3' --> 5' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.949
ARR00322.1
D-alanine--poly(phosphoribitol) ligase subunit 1; Pfam matches to PF00501.24 AMP-binding, and to PF13193.2 AMP-binding_C; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.928
ARR01288.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; Pfam matches to PF00501.24 AMP-binding, and to PF13193.2 AMP-binding_C.
   
 0.923
acpP2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.899
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.893
ARR00004.1
Hypothetical protein.
       0.814
kpsD
Capsular polysaccharide export system, periplasmic protein; Pfam matches to PF02563.12 Poly_export, and to PF10531.5 SLBB, and to PF06251.7 Caps_synth_GfcC.
 
     0.662
ARR00639.1
Ankyrin domain protein; Pfam match to PF12796.3 Ank_2.
  
 0.657
ARR01292.1
SAM-dependent methyltransferase; Pfam match to PF13489.2 Methyltransf_23.
   
 
 0.628
Your Current Organism:
Campylobacter sp. RM6137
NCBI taxonomy Id: 1660073
Other names: C. sp. RM6137
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.