STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550065_03572Unannotated protein. (280 aa)    
Predicted Functional Partners:
GCA_001550065_03558
Unannotated protein.
 
 
 0.884
GCA_001550065_03569
Unannotated protein.
 
     0.785
GCA_001550065_03568
Unannotated protein.
 
     0.757
GCA_001550065_03571
Unannotated protein.
    
  0.747
GCA_001550065_03570
Unannotated protein.
       0.732
GCA_001550065_00685
Unannotated protein.
  
  
0.715
GCA_001550065_02834
Unannotated protein.
  
  
0.709
GCA_001550065_03081
Unannotated protein.
 
  
  0.704
GCA_001550065_03346
Unannotated protein.
    
  0.679
GCA_001550065_00594
Unannotated protein.
  
 
 0.673
Your Current Organism:
Kordiimonas lipolytica
NCBI taxonomy Id: 1662421
Other names: CGMCC 1.15304, JCM 30877, K. lipolytica, Kordiimonas lipolytica Wu et al. 2016, Kordiimonas sp. M41, strain M41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.