STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62633.1Glutamate dehydrogenase/leucine dehydrogenase-like protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (351 aa)    
Predicted Functional Partners:
glsF
Glutamate synthase (NADPH).
  
 
 0.997
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.920
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
   
 0.918
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
   
 
 0.915
solA
Putative sarcosine oxidase.
  
  
 0.802
AHF62634.1
Hypothetical protein.
  
    0.783
icd
Isocitrate dehydrogenase.
   
 0.697
pdhA
Pyruvate dehydrogenase (lipoamide); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
  
 0.643
AHF62631.1
Putative glycine betaine transporter, BCCT family protein; Belongs to the BCCT transporter (TC 2.A.15) family.
 
     0.638
AHF62636.1
Phosphoglucomutase/phosphomannomutase family protein.
  
  
 0.598
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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