STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63152.1Putative membrane associated protease. (402 aa)    
Predicted Functional Partners:
ftsI
Peptidoglycan glycosyltransferase.
       0.799
AHF63153.1
Hypothetical protein.
       0.773
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily.
       0.651
AHF63150.1
Putative dihydroorotase.
  
    0.595
cobC
Putative alpha-ribazole-5'-P phosphatase; Belongs to the phosphoglycerate mutase family.
  
    0.590
AHF63156.1
Cyclic nucleotide-binding domain (cNMP-BD) protein.
       0.590
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
     0.484
AHF63133.1
Hypothetical protein.
  
     0.430
AHF62724.1
Clp protease adaptor; Belongs to the ClpS family.
 
    0.429
drrB
Putative multidrug efflux ABC transporter.
   
  
 0.426
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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