STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63346.1Peroxiredoxin; KEGG: pmf:P9303_14621 thioredoxin peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal. (200 aa)    
Predicted Functional Partners:
EHA63025.1
TIGRFAM: Thioredoxin reductase; KEGG: pma:Pro1245 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain.
  
 0.999
EHA60489.1
KEGG: cyc:PCC7424_0989 ParB domain protein nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease.
   
 0.978
EHA63890.1
KEGG: pmj:P9211_09671 hypothetical protein.
  
 0.933
EHA64305.1
Thioredoxin; KEGG: syf:Synpcc7942_1793 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
  
 
 0.750
EHA63079.1
Thioredoxin; KEGG: pmj:P9211_11291 thiol-disulfide isomerase and thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
  
 
 0.681
EHA62503.1
PFAM: Glutathione peroxidase; KEGG: pmt:PMT0125 glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.639
EHA62002.1
PFAM: Ferritin/Dps protein; KEGG: pmf:P9303_29571 Dps protein family protein; Belongs to the Dps family.
  
  
 0.545
EHA63347.1
KEGG: pmt:PMT0753 hypothetical protein.
       0.515
EHA61939.1
KEGG: pmt:PMT2164 metallo-beta-lactamase domain-containing protein; PFAM: Flavin reductase-like, FMN-binding; Beta-lactamase-like; SMART: Flavin reductase-like, FMN-binding; Beta-lactamase-like; overlaps another CDS with the same product name.
     
 0.502
EHA60243.1
TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: pmf:P9303_21731 superfamily II DNA helicase; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.
    
   0.493
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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