STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA61755.1KEGG: pmf:P9303_26291 4-amino-4-deoxy-L-arabinose transferase. (708 aa)    
Predicted Functional Partners:
EHA61754.1
KEGG: pmi:PMT9312_1132 hypothetical protein.
       0.773
EHA60244.1
KEGG: pmt:PMT0188 hypothetical protein.
  
     0.749
EHA60652.1
KEGG: pmt:PMT1972 hypothetical protein.
  
     0.744
EHA59282.1
KEGG: pmt:PMT1771 hypothetical protein.
  
     0.742
EHA60548.1
KEGG: pmt:PMT1592 hypothetical protein.
  
     0.736
EHA64118.1
Peptidase M10A and M12B matrixin and adamalysin; KEGG: pmt:PMT0454 hypothetical protein; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase.
  
     0.731
EHA62492.1
KEGG: cyj:Cyan7822_1390 hypothetical protein.
  
     0.728
EHA60076.1
KEGG: pmt:PMT0352 integral membrane protein, interacts with FtsH; Belongs to the BI1 family.
  
     0.727
EHA63072.1
KEGG: pmf:P9303_08961 hypothetical protein.
  
  
 0.720
EHA63575.1
KEGG: cyj:Cyan7822_1390 hypothetical protein.
  
     0.705
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.