STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60435.1Protein of unknown function DUF1257; PFAM: Uncharacterised protein family Ycf35; KEGG: pmf:P9303_04461 hypothetical protein. (130 aa)    
Predicted Functional Partners:
EHA60434.1
KEGG: pmf:P9303_04481 3Fe-4S ferredoxin.
 
     0.890
EHA60433.1
PFAM: NADP-dependent oxidoreductase domain; KEGG: pmf:P9303_04491 aldo/keto reductase family protein.
 
     0.863
EHA60436.1
KEGG: pme:NATL1_18781 hypothetical protein.
       0.773
EHA63183.1
KEGG: npu:Npun_F3905 hypothetical protein.
  
     0.746
EHA63890.1
KEGG: pmj:P9211_09671 hypothetical protein.
  
     0.745
EHA60437.1
PFAM: PBS lyase HEAT-like repeat; HEAT; KEGG: pmt:PMT1501 hypothetical protein.
 
     0.734
EHA63636.1
KEGG: pmj:P9211_10191 hypothetical protein.
  
     0.727
EHA64224.1
KEGG: pmf:P9303_07371 single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding.
  
     0.704
EHA64249.1
KEGG: pmf:P9303_07011 hypothetical protein.
  
     0.703
EHA62051.1
PFAM: Phosphatidate cytidylyltransferase; KEGG: pmf:P9303_29961 dolichol kinase.
  
     0.692
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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