STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX79870.1PD-(D/E)XK nuclease superfamily protein. (848 aa)    
Predicted Functional Partners:
CUX79869.1
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
    
 0.833
CUX79867.1
Hypothetical protein.
       0.801
CUX79868.1
Hypothetical protein.
       0.801
CUX79866.1
Helicase conserved C-terminal domain-containing protein.
       0.786
CUX79865.1
Hypothetical protein.
       0.773
CUX79880.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
   
  0.724
uvrD
ATP-dependent DNA helicase, Rep family.
   
  0.724
CUX79871.1
ADP-ribosylglycohydrolase.
       0.502
CUX79872.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
       0.481
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.