STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001050155_03773Unannotated protein. (351 aa)    
Predicted Functional Partners:
GCA_001050155_03772
Unannotated protein.
 
  0.971
GCA_001050155_03771
Unannotated protein.
 
 
  0.959
GCA_001050155_03774
Unannotated protein.
 
  
 
0.904
GCA_001050155_03472
Unannotated protein.
 
 
  0.880
GCA_001050155_03770
Unannotated protein.
 
 
  0.874
GCA_001050155_00198
Unannotated protein.
 
 
  0.873
GCA_001050155_03473
Unannotated protein.
  
 
  0.820
GCA_001050155_03935
Unannotated protein.
 
 
  0.812
GCA_001050155_03474
Unannotated protein.
  
 
  0.750
GCA_001050155_00197
Unannotated protein.
  
 
  0.746
Your Current Organism:
Nitratireductor soli
NCBI taxonomy Id: 1670619
Other names: JCM 30640, MCCC 1K00508, N. soli, Nitratireductor sp. ZZ-1, strain ZZ-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.