STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001512425_01743Unannotated protein. (163 aa)    
Predicted Functional Partners:
GCA_001512425_01837
Unannotated protein.
 
 0.998
GCA_001512425_00644
Unannotated protein.
  
 
 0.996
GCA_001512425_01451
Unannotated protein.
 
 
 0.971
GCA_001512425_01115
Unannotated protein.
  
 0.957
GCA_001512425_00340
Unannotated protein.
 
 
 0.953
GCA_001512425_00633
Unannotated protein.
 
 
 0.953
GCA_001512425_00148
Unannotated protein.
 
 0.943
GCA_001512425_01203
Unannotated protein.
 
 0.943
GCA_001512425_01283
Unannotated protein.
 
 0.943
GCA_001512425_01587
Unannotated protein.
 
 0.943
Your Current Organism:
Clostridiaceae bacterium DTU054
NCBI taxonomy Id: 1671643
Other names: C. bacterium DTU054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.