STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_0237Predicted unusual protein kinase. (520 aa)    
Predicted Functional Partners:
eif5a
Translation initiation factor aIF5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
    
 0.748
CPM_1487
Methylase involved in ubiquinone/menaquinone biosynthesis.
    
 
 0.668
tatC
Twin-arginine translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
 
  
 0.579
CPM_0238
Multipass membrane protein.
       0.548
CPM_0236
Hypothetical protein.
       0.509
CPM_1692
Twin-arginine translocase subunit TatA.
  
  
 0.502
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
      0.486
CPM_0113
Predicted metal-dependent hydrolase.
 
     0.457
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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