STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001604565_00849Unannotated protein. (525 aa)    
Predicted Functional Partners:
GCA_001604565_00847
Unannotated protein.
 
 
 0.943
GCA_001604565_00848
Unannotated protein.
 
     0.911
GCA_001604565_00846
Unannotated protein.
       0.782
GCA_001604565_00845
Unannotated protein.
       0.741
GCA_001604565_01817
Unannotated protein.
  
     0.740
GCA_001604565_01038
Unannotated protein.
  
 
 0.635
GCA_001604565_00843
Unannotated protein.
  
 
 0.616
GCA_001604565_01635
Unannotated protein.
  
 
  0.569
GCA_001604565_01972
Unannotated protein.
  
 
  0.569
GCA_001604565_00850
Unannotated protein.
       0.521
Your Current Organism:
Puniceicoccales bacterium Verruco01
NCBI taxonomy Id: 1674912
Other names: P. bacterium Verruco_01, Puniceicoccales bacterium Verruco_01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.