STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pro_0186Uncharacterized secreted protein; Conserved in cyanobacteria. (533 aa)    
Predicted Functional Partners:
Pro_1723
Predicted metal-dependent protease of the PAD1/JAB1 superfamily.
  
     0.758
arnT-2
Glycosyltransferase of PMT family.
  
     0.749
Pro_0372
Uncharacterized protein; Conserved in cyanobacteria.
  
     0.734
Pro_0741
Uncharacterized membrane protein; Conserved in cyanobacteria.
  
     0.724
Pro_1269
Porin homolog; Major outer membrane protein, SLH domain; Belongs to the OprB family.
  
    0.712
Pro_1258
Uncharacterized protein; Conserved in cyanobacteria.
  
     0.706
Pro_0269
Uncharacterized membrane protein; Conserved in cyanobacteria.
  
     0.698
Pro_0512
Uncharacterized membrane protein; Conserved in cyanobacteria.
  
     0.695
hli5
High light inducible protein hli5; HLIP.
  
     0.694
Pro_0144
Uncharacterized protein; Conserved in cyanobacteria; Belongs to the UPF0367 family.
  
     0.694
Your Current Organism:
Prochlorococcus marinus CCMP1375
NCBI taxonomy Id: 167539
Other names: P. marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus SS120, Prochlorococcus marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus subsp. marinus str. SS120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.