Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| lpd | spoU-3 | Pro_1372 | Pro_1373 | Dihydrolipoamide dehydrogenase; Diaphorase. | rRNA methylase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.799 |
| lpd | trpC | Pro_1372 | Pro_1371 | Dihydrolipoamide dehydrogenase; Diaphorase. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.778 |
| pabA | trpA | Pro_0209 | Pro_0574 | Anthranilate/para-aminobenzoate synthase component II. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.939 |
| pabA | trpB | Pro_0209 | Pro_0188 | Anthranilate/para-aminobenzoate synthase component II. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.924 |
| pabA | trpC | Pro_0209 | Pro_1371 | Anthranilate/para-aminobenzoate synthase component II. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.995 |
| pabA | trpD | Pro_0209 | Pro_0744 | Anthranilate/para-aminobenzoate synthase component II. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.992 |
| pabA | trpD-2 | Pro_0209 | Pro_1859 | Anthranilate/para-aminobenzoate synthase component II. | Anthranilate phosphoribosyltransferase. | 0.837 |
| pabA | trpE | Pro_0209 | Pro_1732 | Anthranilate/para-aminobenzoate synthase component II. | Anthranilate/para-aminobenzoate synthase component I. | 0.999 |
| pabA | trpE-2 | Pro_0209 | Pro_1856 | Anthranilate/para-aminobenzoate synthase component II. | Anthranilate/para-aminobenzoate synthase component I. | 0.999 |
| pabA | trpF | Pro_0209 | Pro_0538 | Anthranilate/para-aminobenzoate synthase component II. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.939 |
| spoU-3 | lpd | Pro_1373 | Pro_1372 | rRNA methylase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Dihydrolipoamide dehydrogenase; Diaphorase. | 0.799 |
| spoU-3 | trpC | Pro_1373 | Pro_1371 | rRNA methylase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.755 |
| trpA | pabA | Pro_0574 | Pro_0209 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Anthranilate/para-aminobenzoate synthase component II. | 0.939 |
| trpA | trpB | Pro_0574 | Pro_0188 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.999 |
| trpA | trpC | Pro_0574 | Pro_1371 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.998 |
| trpA | trpD | Pro_0574 | Pro_0744 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.963 |
| trpA | trpD-2 | Pro_0574 | Pro_1859 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Anthranilate phosphoribosyltransferase. | 0.816 |
| trpA | trpE | Pro_0574 | Pro_1732 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Anthranilate/para-aminobenzoate synthase component I. | 0.911 |
| trpA | trpE-2 | Pro_0574 | Pro_1856 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Anthranilate/para-aminobenzoate synthase component I. | 0.861 |
| trpA | trpF | Pro_0574 | Pro_0538 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.984 |
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