STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABM71408.1NifS-like aminotransferase class-V; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]. (381 aa)    
Predicted Functional Partners:
thiF
Molybdopterin biosynthesis protein; COG476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism].
 
 
 0.987
ABM72176.1
Possible cysteine desulfurase (class-V aminotransferase family); COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].
  
  
 
0.923
ABM71226.1
Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family.
   
 
 0.738
acpP
Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
 
 0.702
ABM71407.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].
       0.638
ABM71339.1
COG316 Uncharacterized conserved protein [Function unknown]; Belongs to the HesB/IscA family.
 
  
 0.571
ABM71288.1
Putative cysteine desulfurase or selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
0.567
ABM71688.1
COG694 Thioredoxin-like proteins and domains [Posttranslational modification, protein turnover, chaperones].
  
 
 0.564
ABM73081.1
COG316 Uncharacterized conserved protein [Function unknown].
  
  
 0.469
Your Current Organism:
Prochlorococcus marinus MIT9515
NCBI taxonomy Id: 167542
Other names: P. marinus str. MIT 9515, Prochlorococcus marinus str. MIT 9515
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