STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
degTPutative pleiotropic regulatory protein; COG399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]; Belongs to the DegT/DnrJ/EryC1 family. (404 aa)    
Predicted Functional Partners:
ABM71515.1
Probable oxidoreductase; COG673 Predicted dehydrogenases and related proteins [General function prediction only].
  
 0.799
ABM71525.1
Conserved hypothetical protein.
  
    0.719
ABM72579.1
Nucleotide-diphosphate-sugar epimerase, membrane associated; COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
 
  
 0.708
ABM71935.1
Hypothetical protein; COG673 Predicted dehydrogenases and related proteins [General function prediction only].
 
  
 0.643
fabI
COG623 Enoyl-[acyl-carrier-protein].
  
    0.584
rfbB
COG1088 dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.581
hisB
COG131 Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism].
       0.546
manC
COG836 Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.528
ABM72008.1
Putative oxidoreductase; COG673 Predicted dehydrogenases and related proteins [General function prediction only].
 
  
 0.515
folK
Possible 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase.
      
 0.450
Your Current Organism:
Prochlorococcus marinus MIT9515
NCBI taxonomy Id: 167542
Other names: P. marinus str. MIT 9515, Prochlorococcus marinus str. MIT 9515
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