STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABM71544.1Selenide,water dikinase; COG1252 NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]. (722 aa)    
Predicted Functional Partners:
ABM72522.1
COG492 Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].
   
 0.963
ABM71449.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COG492 Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].
    
 0.940
ABM71288.1
Putative cysteine desulfurase or selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
 0.920
ABM72215.1
COG2603 Predicted ATPase [General function prediction only].
 
   
 0.886
phnD
Putative phosphonate binding protein for ABC transporter; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism].
 
     0.675
mtnP
5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.
  
    0.633
ABM71953.1
COG3639 ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism].
 
     0.614
ABM71991.1
COG695 Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones].
 
   
 0.594
thiF
Molybdopterin biosynthesis protein; COG476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism].
  
 
 0.582
ABM71226.1
Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family.
     
 0.562
Your Current Organism:
Prochlorococcus marinus MIT9515
NCBI taxonomy Id: 167542
Other names: P. marinus str. MIT 9515, Prochlorococcus marinus str. MIT 9515
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