STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcyAFerredoxin-dependent biliverdin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family. (241 aa)    
Predicted Functional Partners:
ho1
COG5398 Heme oxygenase [Inorganic ion transport and metabolism].
 
  
 0.954
pebA
Phycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family.
     
 0.941
ABM72042.1
ABC-transporter, membrane spanning component; COG577 ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].
 
     0.879
ABM72043.1
Possible ABC transporter component.
 
     0.861
ABM72041.1
COG1136 ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].
       0.812
ABM72040.1
Conserved hypothetical protein.
       0.778
ABM71962.1
Conserved hypothetical protein.
  
     0.770
ABM71325.1
Conserved hypothetical protein.
  
     0.768
ABM72698.1
Conserved hypothetical protein.
  
     0.768
ABM72184.1
Conserved hypothetical protein.
  
     0.763
Your Current Organism:
Prochlorococcus marinus MIT9515
NCBI taxonomy Id: 167542
Other names: P. marinus str. MIT 9515, Prochlorococcus marinus str. MIT 9515
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