STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABO16727.1COG265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]. (373 aa)    
Predicted Functional Partners:
ABO16728.1
Hypothetical protein.
       0.572
ABO16730.1
Conserved hypothetical protein.
       0.517
ABO16729.1
Conserved hypothetical protein.
       0.501
ABO17963.1
COG492 Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].
  
 
 0.485
gltB
Ferredoxin-dependent glutamate synthase, Fd-GOGAT; COG69 Glutamate synthase domain 2 [Amino acid transport and metabolism].
     
 0.470
ABO16662.1
TPR repeat.
   
 0.456
ABO18059.1
Hypothetical protein; COG1834 N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism].
  
     0.431
ABO16731.1
Possible high light inducible protein.
       0.425
ABO17163.1
COG681 Signal peptidase I [Intracellular trafficking and secretion]; Belongs to the peptidase S26 family.
     
 0.418
Your Current Organism:
Prochlorococcus marinus MIT9301
NCBI taxonomy Id: 167546
Other names: P. marinus str. MIT 9301, Prochlorococcus marinus str. MIT 9301
Server load: high (88%) [HD]