Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABO16913.1 | ABO17033.1 | P9301_02901 | P9301_04101 | COG400 Predicted esterase [General function prediction only]. | Conserved hypothetical protein. | 0.443 |
ABO16913.1 | ABO17567.1 | P9301_02901 | P9301_09441 | COG400 Predicted esterase [General function prediction only]. | COG1100 GTPase SAR1 and related small G proteins [General function prediction only]. | 0.554 |
ABO16913.1 | purH | P9301_02901 | P9301_02891 | COG400 Predicted esterase [General function prediction only]. | AICARFT/IMPCHase bienzyme:Methylglyoxal synthase-like domain-containing protein; COG138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) [Nucleotide transport and metabolism]. | 0.673 |
ABO17033.1 | ABO16913.1 | P9301_04101 | P9301_02901 | Conserved hypothetical protein. | COG400 Predicted esterase [General function prediction only]. | 0.443 |
ABO17567.1 | ABO16913.1 | P9301_09441 | P9301_02901 | COG1100 GTPase SAR1 and related small G proteins [General function prediction only]. | COG400 Predicted esterase [General function prediction only]. | 0.554 |
purH | ABO16913.1 | P9301_02891 | P9301_02901 | AICARFT/IMPCHase bienzyme:Methylglyoxal synthase-like domain-containing protein; COG138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) [Nucleotide transport and metabolism]. | COG400 Predicted esterase [General function prediction only]. | 0.673 |