STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureDUrease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (300 aa)    
Predicted Functional Partners:
ureF
Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.998
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.982
ureB
Urease beta subunit; COG832 Urea amidohydrolase (urease) beta subunit [Amino acid transport and metabolism]; Belongs to the urease beta subunit family.
 
 
 0.982
ureE
Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.969
ureA
Urease gamma subunit; COG831 Urea amidohydrolase (urease) gamma subunit [Amino acid transport and metabolism]; Belongs to the urease gamma subunit family.
 
 
 0.969
ureC
Urease alpha subunit; COG804 Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 
  
 0.959
ABO17509.1
Putative urea ABC transporter, substrate binding protein; COG683 ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism].
 
   
 0.649
livF
Putative ATP-binding subunit of urea ABC transport system; COG410 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].
 
   
 0.594
urtC
Putative membrane protein of urea ABC transport system; COG4177 ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.585
livH
Putative urea ABC transporter; COG559 Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism]; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.568
Your Current Organism:
Prochlorococcus marinus MIT9301
NCBI taxonomy Id: 167546
Other names: P. marinus str. MIT 9301, Prochlorococcus marinus str. MIT 9301
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