STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_2377Glycosyl hydrolase, family 10; Identified by match to protein family HMM PF00331. (386 aa)    
Predicted Functional Partners:
CPS_2370
Glycosyl hydrolase, family 10; Identified by match to protein family HMM PF00331.
 
     0.778
CPS_2375
Sulfatase family protein; Identified by similarity to GP:3046314; match to protein family HMM PF00884.
     0.584
CPS_2376
Transcription regulator, LacI family; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
 
     0.558
CPS_4110
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.530
CPS_2374
Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.459
bglA
Beta-glucanase; Identified by similarity to SP:P45798; match to protein family HMM PF00722.
 
   
 0.443
CPS_3714
Glycosyl hydrolase, family 30; Identified by match to protein family HMM PF02055; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.423
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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