Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPS_1014 | CPS_1798 | CPS_1014 | CPS_1798 | iron(III) ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ATP-dependent peptidase, M41 family; Identified by similarity to GP:8051696; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF07724; Belongs to the AAA ATPase family. | 0.612 |
| CPS_1014 | CPS_2980 | CPS_1014 | CPS_2980 | iron(III) ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding/permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | 0.496 |
| CPS_1014 | msbA2 | CPS_1014 | CPS_2774 | iron(III) ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Lipid ABC transporter, ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.745 |
| CPS_1798 | CPS_1014 | CPS_1798 | CPS_1014 | ATP-dependent peptidase, M41 family; Identified by similarity to GP:8051696; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF07724; Belongs to the AAA ATPase family. | iron(III) ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.612 |
| CPS_1798 | CPS_2980 | CPS_1798 | CPS_2980 | ATP-dependent peptidase, M41 family; Identified by similarity to GP:8051696; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF07724; Belongs to the AAA ATPase family. | ABC transporter, ATP-binding/permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | 0.506 |
| CPS_1798 | dnaK1 | CPS_1798 | CPS_1313 | ATP-dependent peptidase, M41 family; Identified by similarity to GP:8051696; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF07724; Belongs to the AAA ATPase family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.963 |
| CPS_1798 | dnaK2 | CPS_1798 | CPS_3821 | ATP-dependent peptidase, M41 family; Identified by similarity to GP:8051696; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF07724; Belongs to the AAA ATPase family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.961 |
| CPS_1798 | msbA | CPS_1798 | CPS_2125 | ATP-dependent peptidase, M41 family; Identified by similarity to GP:8051696; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF07724; Belongs to the AAA ATPase family. | Lipid ABC transporter, ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.496 |
| CPS_1798 | msbA2 | CPS_1798 | CPS_2774 | ATP-dependent peptidase, M41 family; Identified by similarity to GP:8051696; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF07724; Belongs to the AAA ATPase family. | Lipid ABC transporter, ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.583 |
| CPS_2771 | CPS_2772 | CPS_2771 | CPS_2772 | Identified by match to protein family HMM PF00501. | Conserved hypothetical protein; Identified by similarity to SP:Q99ZA8. | 0.773 |
| CPS_2771 | CPS_2773 | CPS_2771 | CPS_2773 | Identified by match to protein family HMM PF00501. | Putative lipid A biosynthesis acyltransferase. | 0.789 |
| CPS_2771 | msbA2 | CPS_2771 | CPS_2774 | Identified by match to protein family HMM PF00501. | Lipid ABC transporter, ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.808 |
| CPS_2772 | CPS_2771 | CPS_2772 | CPS_2771 | Conserved hypothetical protein; Identified by similarity to SP:Q99ZA8. | Identified by match to protein family HMM PF00501. | 0.773 |
| CPS_2772 | CPS_2773 | CPS_2772 | CPS_2773 | Conserved hypothetical protein; Identified by similarity to SP:Q99ZA8. | Putative lipid A biosynthesis acyltransferase. | 0.773 |
| CPS_2772 | msbA2 | CPS_2772 | CPS_2774 | Conserved hypothetical protein; Identified by similarity to SP:Q99ZA8. | Lipid ABC transporter, ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.773 |
| CPS_2773 | CPS_2771 | CPS_2773 | CPS_2771 | Putative lipid A biosynthesis acyltransferase. | Identified by match to protein family HMM PF00501. | 0.789 |
| CPS_2773 | CPS_2772 | CPS_2773 | CPS_2772 | Putative lipid A biosynthesis acyltransferase. | Conserved hypothetical protein; Identified by similarity to SP:Q99ZA8. | 0.773 |
| CPS_2773 | lpxK | CPS_2773 | CPS_2126 | Putative lipid A biosynthesis acyltransferase. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.631 |
| CPS_2773 | msbA2 | CPS_2773 | CPS_2774 | Putative lipid A biosynthesis acyltransferase. | Lipid ABC transporter, ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.821 |
| CPS_2980 | CPS_1014 | CPS_2980 | CPS_1014 | ABC transporter, ATP-binding/permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | iron(III) ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.496 |
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