STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATC1_1347ABC-type Mn2+/Zn2+ transport system, ATPase component. (292 aa)    
Predicted Functional Partners:
ATC1_1348
ABC-type Mn2+/Zn2+ transport system, permease component.
 0.999
ATC1_1182
ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.990
ATC1_1349
Hypothetical protein.
       0.582
ATC1_1344
Hypothetical protein.
       0.570
ATC1_1345
Hypothetical protein.
       0.551
ATC1_1346
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
       0.551
ATC1_13713
Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family.
  
  
 0.476
GAP41125.1
ABC-type transport system.
  
 
  0.475
ATC1_13441
ABC-type transport system.
  
 
 0.471
ATC1_11208
Copper-(or silver)-translocating P-type ATPase.
     
 0.423
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.