STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP42099.1Dolichyl-phosphate-mannose-protein mannosyltransferase. (512 aa)    
Predicted Functional Partners:
GAP42396.1
Alpha/beta hydrolase family.
  
     0.505
GAP42098.1
Protein containing methyltransferase domain.
  
    0.499
GAP43579.1
Protein containing Por secretion system C-terminal sorting domain.
 
     0.473
GAP42100.1
C_GCAxxG_C_C family probable redox protein.
       0.445
GAP42097.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
    
0.444
Your Current Organism:
Lentimicrobium saccharophilum
NCBI taxonomy Id: 1678841
Other names: Bacteroidales bacterium TBC1, DSM 100618, JCM 30898, L. saccharophilum, Lentimicrobium saccharophilum Sun et al. 2016, strain TBC1
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