STRINGSTRING
gdhA protein (Bifidobacterium adolescentis) - STRING interaction network
"gdhA" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhAannotation not available (448 aa)    
Predicted Functional Partners:
gltB
annotation not available (1523 aa)
   
  0.990
glnA1
annotation not available (478 aa)
   
 
  0.956
gltD
annotation not available (515 aa)
   
 
  0.915
BADO_1181
annotation not available (445 aa)
   
 
  0.915
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis- the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate; Belongs to the ArgJ family (390 aa)
     
  0.914
ypeA
annotation not available (144 aa)
   
    0.911
BADO_0884
annotation not available (510 aa)
   
 
  0.909
BADO_0204
annotation not available (396 aa)
   
 
  0.909
BADO_1434
annotation not available (482 aa)
     
 
  0.909
icd1
annotation not available (406 aa)
     
  0.874
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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