STRINGSTRING
recD protein (Bifidobacterium adolescentis) - STRING interaction network
"recD" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recDannotation not available (464 aa)    
Predicted Functional Partners:
BADO_0037
annotation not available (221 aa)
 
 
  0.914
BADO_0038
annotation not available (53 aa)
              0.845
BADO_0182
annotation not available (353 aa)
   
          0.722
BADO_1205
annotation not available (259 aa)
   
          0.707
BADO_0094
annotation not available (885 aa)
   
          0.701
BADO_1172
annotation not available (362 aa)
   
        0.691
BADO_0056
Putative fluoride ion transporter CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity (352 aa)
   
        0.681
BADO_1197
annotation not available (203 aa)
   
          0.649
BADO_1409
annotation not available (385 aa)
   
          0.646
BADO_1547
annotation not available (523 aa)
   
          0.639
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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