STRINGSTRING
fdxC protein (Bifidobacterium adolescentis) - STRING interaction network
"fdxC" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdxCannotation not available (106 aa)    
Predicted Functional Partners:
gltB
annotation not available (1523 aa)
   
      0.988
BADO_0307
annotation not available (382 aa)
 
        0.909
BADO_0606
annotation not available (618 aa)
   
 
  0.758
BADO_0305
annotation not available (499 aa)
              0.722
sucD
Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit (307 aa)
   
   
  0.701
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation (399 aa)
              0.514
BADO_0476
annotation not available (431 aa)
   
   
  0.436
BADO_0047
annotation not available (483 aa)
 
  0.416
typA
annotation not available (643 aa)
 
          0.415
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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