STRINGSTRING
BADO_0407 protein (Bifidobacterium adolescentis) - STRING interaction network
"BADO_0407" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BADO_0407annotation not available (728 aa)    
Predicted Functional Partners:
BADO_0406
annotation not available (221 aa)
 
        0.835
BADO_0582
annotation not available (615 aa)
 
 
  0.738
BADO_0399
annotation not available (718 aa)
 
   
  0.708
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (948 aa)
         
  0.702
BADO_0446
annotation not available (1195 aa)
         
  0.696
BADO_0411
annotation not available (407 aa)
         
  0.695
kfoC_1
annotation not available (308 aa)
         
  0.695
BADO_0309
annotation not available (379 aa)
         
  0.693
BADO_0402
annotation not available (472 aa)
 
     
  0.669
sigA
RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (478 aa)
     
 
  0.666
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
Server load: low (11%) [HD]