STRINGSTRING
kfoC_1 protein (Bifidobacterium adolescentis) - STRING interaction network
"kfoC_1" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kfoC_1annotation not available (308 aa)    
Predicted Functional Partners:
BADO_0407
annotation not available (728 aa)
         
  0.695
perM
annotation not available (507 aa)
              0.638
BADO_0411
annotation not available (407 aa)
              0.636
BADO_1357
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose (480 aa)
         
  0.512
BADO_1512
annotation not available (864 aa)
     
 
  0.483
BADO_1116
annotation not available (85 aa)
   
          0.477
BADO_0704
annotation not available (1034 aa)
 
     
  0.469
BADO_1516
annotation not available (1011 aa)
   
 
0.467
BADO_0412
annotation not available (481 aa)
              0.447
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (948 aa)
   
   
  0.446
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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