STRINGSTRING
perM protein (Bifidobacterium adolescentis) - STRING interaction network
"perM" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
perMannotation not available (507 aa)    
Predicted Functional Partners:
BADO_0411
annotation not available (407 aa)
              0.893
xylA
annotation not available (449 aa)
           
  0.652
kfoC_1
annotation not available (308 aa)
              0.638
xylB
annotation not available (506 aa)
         
  0.631
hprT
annotation not available (190 aa)
              0.613
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family (699 aa)
         
  0.612
BADO_0412
annotation not available (481 aa)
              0.606
BADO_0418
annotation not available (191 aa)
 
          0.573
BADO_0567
annotation not available (811 aa)
 
   
  0.550
BADO_1184
annotation not available (256 aa)
   
          0.547
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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