STRINGSTRING
xylB protein (Bifidobacterium adolescentis) - STRING interaction network
"xylB" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBannotation not available (506 aa)    
Predicted Functional Partners:
xylA
annotation not available (449 aa)
 
 
  0.994
BADO_0324
annotation not available (346 aa)
 
  0.961
BADO_0842
annotation not available (221 aa)
 
  0.929
ulaF
annotation not available (230 aa)
       
  0.914
BADO_0438
annotation not available (410 aa)
 
     
  0.826
galM
annotation not available (316 aa)
 
   
  0.674
BADO_0326
annotation not available (909 aa)
   
   
  0.665
perM
annotation not available (507 aa)
         
  0.631
ptsG
annotation not available (697 aa)
     
   
  0.571
BADO_0433
annotation not available (543 aa)
   
   
  0.565
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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