STRINGSTRING
pup protein (Bifidobacterium adolescentis) - STRING interaction network
"pup" - Prokaryotic ubiquitin-like protein Pup in Bifidobacterium adolescentis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pupProkaryotic ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation; Belongs to the prokaryotic ubiquitin-like protein family (63 aa)    
Predicted Functional Partners:
pafA
Pup--protein ligase; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine (488 aa)
 
          0.878
BADO_1438
annotation not available (122 aa)
   
          0.749
BADO_1134
annotation not available (83 aa)
   
          0.748
BADO_1307
annotation not available (541 aa)
   
          0.726
BADO_0991
annotation not available (241 aa)
   
          0.714
BADO_0868
annotation not available (105 aa)
   
          0.688
BADO_0359
annotation not available (294 aa)
   
          0.661
suhB
annotation not available (276 aa)
 
          0.656
BADO_1009
annotation not available (1106 aa)
   
          0.652
BADO_0948
annotation not available (206 aa)
   
          0.636
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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