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pafA protein (Bifidobacterium adolescentis) - STRING interaction network
"pafA" - Pup--protein ligase in Bifidobacterium adolescentis
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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pafAPup--protein ligase; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine (488 aa)    
Predicted Functional Partners:
arc
annotation not available (515 aa)
 
 
  0.970
pup
Prokaryotic ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation; Belongs to the prokaryotic ubiquitin-like protein family (63 aa)
 
          0.878
BADO_1311
annotation not available (141 aa)
   
          0.764
BADO_0560
annotation not available (527 aa)
 
     
0.734
suhB
annotation not available (276 aa)
   
        0.717
crp
annotation not available (246 aa)
   
        0.614
iclR
annotation not available (264 aa)
   
          0.610
glnA1
annotation not available (478 aa)
     
   
  0.566
aspS
Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps- L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily (599 aa)
   
          0.508
BADO_0121
annotation not available (315 aa)
   
          0.463
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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