STRINGSTRING
pyrF protein (Bifidobacterium adolescentis) - STRING interaction network
"pyrF" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrFannotation not available (320 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (231 aa)
 
 
  0.998
pyrB
annotation not available (337 aa)
 
   
  0.992
BADO_0809
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily (472 aa)
 
   
  0.974
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (213 aa)
   
 
  0.965
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (249 aa)
   
 
  0.964
BADO_0808
annotation not available (139 aa)
 
     
  0.959
carA
annotation not available (405 aa)
 
   
  0.943
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily (315 aa)
   
   
  0.925
BADO_0550
annotation not available (313 aa)
   
   
 
0.859
carB
annotation not available (1126 aa)
   
   
  0.853
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
Server load: low (16%) [HD]