STRINGSTRING
ugpA_1 protein (Bifidobacterium adolescentis) - STRING interaction network
"ugpA_1" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpA_1annotation not available (459 aa)    
Predicted Functional Partners:
BADO_0371
annotation not available (558 aa)
 
 
 
  0.940
BADO_1394
annotation not available (416 aa)
     
  0.933
BADO_0020
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (818 aa)
     
 
  0.921
BADO_0397
annotation not available (356 aa)
   
 
  0.918
BADO_1524
annotation not available (414 aa)
     
 
  0.906
BADO_0399
annotation not available (718 aa)
     
 
  0.906
BADO_0754
annotation not available (1768 aa)
     
 
  0.903
BADO_0067
annotation not available (504 aa)
     
 
  0.903
BADO_0799
annotation not available (414 aa)
         
  0.903
glgC
Glucose-1-phosphate adenylyltransferase; Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (414 aa)
         
  0.902
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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