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BADO_0869 protein (Bifidobacterium adolescentis) - STRING interaction network
"BADO_0869" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BADO_0869annotation not available (867 aa)    
Predicted Functional Partners:
BADO_0868
annotation not available (105 aa)
              0.857
BADO_0867
annotation not available (637 aa)
              0.850
rbpA
RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (115 aa)
 
          0.785
guaC
annotation not available (372 aa)
   
      0.746
trmI
tRNA (adenine(58)-N(1))-methyltransferase TrmI; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA (351 aa)
 
 
  0.661
BADO_1041
annotation not available (431 aa)
   
 
  0.654
BADO_1430
annotation not available (869 aa)
   
      0.578
fkbP
annotation not available (135 aa)
 
      0.562
BADO_0906
annotation not available (533 aa)
   
        0.541
rpsA
annotation not available (490 aa)
     
 
  0.538
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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