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BADO_0877 protein (Bifidobacterium adolescentis) - STRING interaction network
"BADO_0877" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BADO_0877annotation not available (269 aa)    
Predicted Functional Partners:
BADO_0034
annotation not available (235 aa)
           
  0.750
odhI
annotation not available (171 aa)
           
  0.750
BADO_0258
annotation not available (259 aa)
   
          0.669
BADO_1078
annotation not available (169 aa)
   
          0.667
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (94 aa)
   
          0.547
BADO_1313
annotation not available (519 aa)
   
          0.537
BADO_0181
annotation not available (219 aa)
   
          0.527
BADO_0699
Transcriptional regulator WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (92 aa)
   
          0.485
pknE
annotation not available (327 aa)
   
          0.483
whiA
Putative sporulation transcription regulator WhiA; May be required for sporulation (316 aa)
   
          0.478
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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