STRINGSTRING
serB1 protein (Bifidobacterium adolescentis) - STRING interaction network
"serB1" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serB1annotation not available (190 aa)    
Predicted Functional Partners:
BADO_0749
annotation not available (156 aa)
   
          0.706
BADO_0970
annotation not available (153 aa)
   
          0.608
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (948 aa)
         
  0.576
BADO_1009
annotation not available (1106 aa)
 
 
 
  0.493
fic
annotation not available (294 aa)
         
  0.477
BADO_1495
annotation not available (486 aa)
   
          0.473
BADO_0956
annotation not available (294 aa)
 
   
  0.425
BADO_1470
annotation not available (352 aa)
   
          0.418
BADO_0155
annotation not available (529 aa)
   
          0.416
BADO_1696
annotation not available (432 aa)
   
        0.411
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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