STRINGSTRING
BADO_0996 protein (Bifidobacterium adolescentis) - STRING interaction network
"BADO_0996" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BADO_0996annotation not available (250 aa)    
Predicted Functional Partners:
BADO_0995
annotation not available (243 aa)
 
      0.898
BADO_1115
annotation not available (948 aa)
 
 
  0.598
yvdD
annotation not available (180 aa)
   
        0.565
pheS
annotation not available (355 aa)
 
          0.558
BADO_1493
annotation not available (466 aa)
 
      0.534
BADO_0617
annotation not available (880 aa)
   
 
  0.524
BADO_0939
annotation not available (455 aa)
 
 
  0.465
BADO_0994
annotation not available (290 aa)
   
        0.459
BADO_0086
annotation not available (998 aa)
 
 
  0.455
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (132 aa)
   
        0.454
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
Server load: low (12%) [HD]