STRINGSTRING
BADO_1000 protein (Bifidobacterium adolescentis) - STRING interaction network
"BADO_1000" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BADO_1000annotation not available (262 aa)    
Predicted Functional Partners:
BADO_1002
annotation not available (241 aa)
 
          0.839
BADO_1107
annotation not available (282 aa)
   
          0.767
BADO_0916
annotation not available (339 aa)
   
          0.733
BADO_0019
annotation not available (145 aa)
   
          0.717
BADO_1313
annotation not available (519 aa)
   
          0.708
BADO_0587
annotation not available (475 aa)
   
          0.669
BADO_0171
annotation not available (382 aa)
   
          0.652
BADO_1191
annotation not available (532 aa)
   
          0.645
xseB
Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family (94 aa)
   
          0.624
BADO_1418
annotation not available (1358 aa)
   
          0.614
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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